Tang X†, Liu GQ†, Zhou JP†, Ren QR, You Q, Tian L, Xin XH, Zhong ZH, Liu BL, Zheng XL, Zhang DW, Malzahn A, Gong ZY, Qi YP*, Zhang, T*, and Zhang Y*. A large-scale whole-genome sequencing analysis reveals highly specific genome editing by both Cas9 and Cpf1(Cas12a) nucleases in rice. Genome Biology 2018, 19:84

You Q, Zhong ZH, Ren QR, Hassan F, Zhang Y*, Zhang T*. CRISPRMatch: An Automatic Calculation And Visualization Tool For High-throughput CRISPR Genome-editing Data Analysis. International Journal of Biological Sciences 2018, 14(8): 858-862.

Hou LL†, Xu M†, Zhang T†, Xu ZH, Wang WY, Zhang JX, Yu MM, Ji W, Zhu CW, Gong ZY, Gu MH, Jiang JM and Yu HX*. Chromosome painting and its applications in cultivated and wild rice. BMC Plant Biology 2018, 18: 110.

Xin H†, Zhang T†, Han YH, Wu YF, Shi JS, Xi ML*, and Jiang JM. (2018) Chromosome painting and comparative physical mapping of the sex chromosomes in Populus tomentosa and Populus deltoides. Chromosoma 2018, 127(3): 313-321.

Braz GT†, He L†, Zhao HN†, Zhang T†, Semrau K, Rouillard JM, Torres GA, Jiang JM*. Comparative oligo-FISH mapping: an efficient and powerful methodology to reveal karyotypic and chromosomal evolution. Genetics 2018, 208(2): 513-523. 

Zhang R, Xue C, Liu GQ, Liu XY, Zhang ML, Wang X, Zhang T*, and Gong ZY*. Segmental Duplication of Chromosome 11 and its Implications for Cell Division and Genome-wide Expression in Rice. Scientific Reports 2017, 1(7): 2689.

Zhang T, Marand A, Jiang JM*: PlantDHS: A Database for DNase I Hypertensive Sites in Plants. Nucleic Acids Research 2016, 44(D1): D1148-D1153. 

Zhang T†, Zhang WL†, and Jiang JM*: Genome-wide nucleosome occupancy and positioning and their impact on gene expression and evolution in plants. Plant Physiology 2015, 168(4): 1406-1416.

Han YH†, Zhang T†, Thammapichai P, Weng YQ, and Jiang JM*: Chromosome-specific painting in Cucumis species using bulked oligonucleotides. Genetics 2015, 200(3):771-779.

Zhu B†, Zhang WL†, Zhang T†, Liu B, Jiang JM*: Genome-wide prediction and validation of intergenic enhancers in Arabidopsis thaliana using open chromatin signature. The Plant Cell 2015, 27(9):2415-2426.

Zhang T†, Talbert PB†, Zhang WL†, Wu YF, Yang ZJ, Henikoff JG, Henikoff S, Jiang JM: The CentO satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres. Proceedings of the National Academy of Sciences of the United States of America 2013, 110(50): E4875–E4883. 

Zhang WL†, Zhang T†, Wu YF†, Jiang JM: Genome-Wide Identification of Regulatory DNA Elements and Protein-Binding Footprints Using Signatures of Open Chromatin in Arabidopsis. The Plant Cell 2012, 24(7):2719-2731.

Yang XM†, Zhao HN†, Zhang T, Zeng ZX, Zhang PD, Zhu B, Han YH, Braz GT, Casler MD, Schmutz J, and Jiang JM*. Amplification and adaptation of centromeric repeats in polyploid switchgrass species. New Phytologist 2018, 218:1645-1657

Dong ZB†, Yu J†, Li H, Huang W, Xu L, Zhao Y, Zhang T, Xu W, Jiang JM, Su Z*, and Jin WW*. Transcriptional and epigenetic adaptation of maize chromosomes in Oat-Maize addition lines. Nucleic Acids Research 2018, 46(10): 5012-5028.

Zhong ZH†, Zhang YX†, You Q†, Tang X, Ren QR, Liu SS, Yang LJ, Wang Y, Liu XP, Liu BL, Zhang T, Zheng XL, Le Y, Zhang Y*, and Qi YP*. Plant genome editing using FnCpf1 and LbCpf1 nucleases at redefined and altered PAM sites. Molecular Plant 2018, 11: 999-1002.

Tang X†, Lowder LG†, Zhang T, Maizahn AA, Zheng XL, Voytas DF, Zhong ZH, Chen YY, Ren QR, Li Q, Kirkland ER, Zhang Y*, and Qi YP*. A CRISPR-Cpf1 system for efficient genome editing and transcriptional repression in plants. Nature Plants 2017, 3: 17018.

Yang LM, Koo, DH, Li D, Zhang T, Jiang JM, Luan FS, Renner SS, Henaff E, Sanseverino W, Garcia-Mas J, Casacuberta J, Senalik DA, Simon PW, Chen JF, and Weng YQ: Next-generation sequencing, FISH mapping and synteny-based modeling reveal mechanisms of decreasing dysploidy in Cucumis. The Plant Journal 2014, 77(1): 16-30. 

Iovene M, Zhang T, Lou Q, Buell CR, Jiang JM: Copy number variation in potato - an asexually propagated autotetraploid species. The Plant Journal 2013, 75(1):80-89.

Dong ZB, Jiang C, Chen X, Zhang T, Ding L, Song W, Luo H, Lai J, Chen H, Liu R, Jin WW: Maize LAZY1 Mediates Shoot Gravitropism and Inflorescence Development through Regulating Auxin Transport, Auxin Signaling, and Light Response. Plant Physiology 2013, 163(3):1306-1322.